Identification of Novel Genes in Eye Development in Balanced Translocation Patients
Ocular developmental disorders cause significant visual handicap and blindness in childhood. Eye development is a complex process involving the interaction of the activity of many genes. Ocular anomalies have been associated with mutations in several genes including PAX6, FOXC1, PITX2, SOX2 and MAF. An efficient means of identifying novel genes in eye development is the analysis of balanced chromosomal translocations in patients with ocular anomalies. We are assessing the genetic defects of a patient with anophthalmia who harbours an apparently balanced de novo translocation. A combination of fluorescence in situ hybridisation (FISH) and comparative genomic hybridisation by microarray (array CGH) is being used to map the breakpoints and define any cryptic deleted regions. In another patient, an alternative strategy involves STS marker mapping of a panel of somatic cell hybrids for translocation breakpoint delineation. It is expected that the translocations may have dysregulated the activity of the genes near the chromosomal breakpoints, or that there may be cryptic gene deletion in these regions. The candidate status of genes in proximity to the breakpoints, is being assessed through EST analysis and ocular expression patterns of the murine orthologues.