Haplotypes of the glucocorticoid receptor gene are associated with gene expression levels and modify the association between body size at birth and cortisol concentrations in adult life
Background: Small size at birth is associated with common adult diseases such as type 2 diabetes and coronary heart disease. Programming of the regulation and function of glucocorticoids by conditions during early life has been suggested to play a key role in explaining this link.
Aim: We assessed whether variation in the Glucocorticoid receptor gene (GR) mediates or modifies the association of small body size at birth with adult hypothalamic-pituitary-adrenal axis (HPAA) function.
Methods/Results: Study subjects (163 men and 274 women) were selected from the Helsinki Birth Cohort of 7086 individuals born in Helsinki, Finland, between 1924-1933, whose birth measurements as well as extensive current metabolic phenotypes were recorded. We genotyped haplotype tagging single nucleotide polymorphisms (SNPs) of the GR locus, and constructed the haplotypes with a SNPHAP software. The type 2 haplotype, apparently the most diverged from the others, was associated with lower birth weight (P=0.02) and length (P=0.01). The association of short length at birth with increased fasting serum total cortisol (P=0.02) and free cortisol index (P=0.02) was confined to carriers of type 2 haplotype (p for interaction haplotype*length at birth=0.06 for total and 0.01 for free cortisol index). Since there are no amino acid changing SNPs in the type 2 haplotype, we assessed whether there was haplotype 2 specific variation in transcription level by sequencing individuals with heterozygous silent SNP tagging the haplotype 2 and comparing the allele peak height ratios between mRNA and genomic DNA samples.
Conclusions: The transcription level of haplotype 2 was shown to be 93.7% of that of the other haplotypes (P=3x10-4). Our data suggest that the GR locus may contribute to the association of small birth size and HPAA function by a mechanism affecting regulation of GR expression.